Research ArticleGENETICS

De novo assembly of the goldfish (Carassius auratus) genome and the evolution of genes after whole-genome duplication

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Science Advances  26 Jun 2019:
Vol. 5, no. 6, eaav0547
DOI: 10.1126/sciadv.aav0547

Article Information

vol. 5 no. 6

Online ISSN: 
History: 
  • Received for publication August 9, 2018
  • Accepted for publication May 21, 2019
  • .

Author Information

  1. Zelin Chen1,*,
  2. Yoshihiro Omori2,*,,
  3. Sergey Koren3,
  4. Takuya Shirokiya4,
  5. Takuo Kuroda4,
  6. Atsushi Miyamoto4,
  7. Hironori Wada5,,
  8. Asao Fujiyama6,
  9. Atsushi Toyoda6,7,
  10. Suiyuan Zhang3,
  11. Tyra G. Wolfsberg3,
  12. Koichi Kawakami5,
  13. Adam M. Phillippy3,
  14. NISC Comparative Sequencing Program8,§,
  15. James C. Mullikin8,9 and
  16. Shawn M. Burgess1,||
  1. 1Translational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.
  2. 2Laboratory for Molecular and Developmental Biology, Institute for Protein Research, Osaka University, Suita, Osaka, Japan.
  3. 3Computational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.
  4. 4Yatomi Station, Aichi Fisheries Research Institute, Yatomi, Aichi, Japan.
  5. 5Laboratory of Molecular and Developmental Biology, National Institute of Genetics, and Department of Genetics, SOKENDAI (The Graduate University for Advanced Studies), Mishima, Shizuoka, Japan.
  6. 6Advanced Genomics Center, National Institute of Genetics, Mishima, Shizuoka, Japan.
  7. 7Center for Information Biology, National Institute of Genetics, Mishima, Shizuoka, Japan.
  8. 8NIH Intramural Sequencing Center, National Human Genome Research Institute, Bethesda, MD, USA.
  9. 9Cancer Genetics and Comparative Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.
  1. ||Corresponding author. Email: burgess{at}mail.nih.gov
  • * These authors contributed equally to this work.

  • Present address: Laboratory of Functional Genomics, Department of Bioscience, Nagahama Institute of Bio-science and Technology, Nagahama, Shiga, Japan.

  • Present address: College of Liberal Arts and Sciences, Kitasato University, Sagamihara, Kanagawa, Japan.

  • § The list of members of the NISC Comparative Sequencing Program can be found in the Supplementary Materials.

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