Science Advances

Supplementary Materials

The PDF file includes:

  • Section S1. Network representations of catalyzed biochemical reaction
  • Section S2. Topological measures
  • Fig. S1. Percentage of nodes in the LCC of a network versus the size of its LCC.
  • Fig. S2. Reaction knockout for unipartite networks.
  • Fig. S3. Additional network measures for individuals and ecosystems show universal scaling across levels.
  • Fig. S4. Scaling of bipartite network structure for individuals and ecosystems.
  • Fig. S5. Additional network measures for randomly sampled individuals and randomly sampled reactions.
  • Fig. S6. Scaling of bipartite network structure for randomly sampled individuals and randomly sampled reactions.
  • Fig. S7. Distributions of network sizes for each domain and across levels of organization.
  • Fig. S8. Biochemical diversity and network topology measures for parsed datasets.
  • Fig. S9. Biochemical diversity and network topology measures for domain-weighted frequency-sampled random reaction networks.
  • Table S1. Percentage of networks in each dataset with x% of nodes in the LCC.
  • Table S2. Distinguishability of individuals and ecosystems, and ecosystems and random genome networks.
  • Legends for data files S1 to S2C
  • References (7375)

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Other Supplementary Material for this manuscript includes the following:

  • Data file S1 (.csv format). Scaling parameters for topological measures with 95% confidence intervals.
  • Data file S2A (.csv format). Summary of measured network properties, by domain.
  • Data file S2B (.csv format). Summary of measured network properties, by levels (parsed data only).
  • Data file S2C (.csv format). Summary of measured network properties, by levels (parsed data excluded).

Files in this Data Supplement: