Table 1 Features of A. ceratii and other dinoflagellate genomes.

CDS, coding regions. N50 measures assembly quality as a weighted median of contig length. Higher N50 values denote greater contiguity.

A. ceratiiSymbiodinium
minutum*
Symbiodinium
kawagutii
Symbiodinium
microadriaticum
Hematodinium sp.§
Genome
Size (Mb)87.7~1,500 (assembled
~616)
~1,180 (assembled
~935.07)
~1,100 (assembled
~808.25)
~4,800
Scaffolds (number)2,35121,89930,0409,695118,385 (>10 kbp)
GC content (%)55.9%43.6%43.97%50.5%
N50 value (kb)8462.747.134.817.2
Genes
Predicted CDS19,92541,92536,85049,109
Average protein length
(amino acids)
6431,6681,041
Predicted tRNAs39
CDS with transcript
data
4,85632,36626,83437,470
CDS with domain
annotation
8,768
Introns
Predicted number51,06695.3%61.1%98.2%
Median size (bases)184499893504.7
Intronless CDS5,464

*From (22).

†From (21).

‡From (20).

§From (14).